A very incomplete list for various tutorials, recently removed only non-functioning links.
Battlegrounds RPG
Part 1:
Focuses on creating the digital game components using a graphics program (in this case, Adobe Photoshop), then organizing the assets into folders for eventual use in Battlegrounds.
Part 2:
Focuses on importing the digital game components into Battlegrounds.
Part 3:
Focuses on laying out the game components into a playable game, and packaging the boardgame conversion for distribution.
d20Pro
A number of d20Pro videos can be seen here.
Epic Table
Epic Table tutorials can be seen here.
Fantasy Grounds
dm-crazy's YouTube videos
doswelk's YouTube videos
MapTool
Various tutorials for MapTools can be found here.